Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs113687324 chr12:54113149 A/C 0.000175 115 42.82 35.67 16.82 KM Plot
THYM rs113738581 chr7:29684725 G/A 5.34E-13 118 38.58 45.87 6 KM Plot
THYM rs11376511 chr6:3269409 G/GC 0 118 4.13 44.3 38.33 KM Plot
THYM rs113799928 chr20:29519156 G/T 2.49E-13 118 38.23 50.1 6 KM Plot
THYM rs113821008 chr7:29720392 TACA/T 3.55E-13 119 37.63 48.18 6 KM Plot
THYM rs113829432 chr7:29725069 C/T 3.51E-13 119 38.13 46.27 6 KM Plot
THYM rs113839093 chr21:44067757 C/T 0.000139 115 40.67 42.9 28.43 KM Plot
THYM rs113854593 chr2:10955543 C/CT 0.000218 117 42.9 38.58 62.72 KM Plot
THYM rs113855341 chr3:52999223 T/TA 0.000238 118 44.38 23.75 25.63 KM Plot
THYM rs113921987 chr3:192296 G/A 7.8E-13 118 44.38 27.1 6 KM Plot
THYM rs113970692 chr20:29518862 C/A 8.34E-6 118 38.33 50.1 10.78 KM Plot
THYM rs113976760 chr1:227352252 A/AGCTACTCAGGAG 8.75E-5 117 19.63 39.45 42.73 KM Plot
THYM rs114036198 chr7:29676300 C/T 4.22E-13 119 38.23 46.07 6 KM Plot
THYM rs11411688 chr1:227351212 C/CT 0.000123 119 19.63 37.13 42.82 KM Plot
THYM rs11413572 chr4:126118826 A/AT 1.26E-6 118 25.48 27.83 46.6 KM Plot